PocketMol: A molecular visualization tool for the Pocket PC

J. R. Gilder; Michael L. Raymer; Travis E. Doom

doi:10.1109/BIBE.2001.974406

PocketMol: A molecular visualization tool for the Pocket PC

J. R. Gilder, Michael L. Raymer, Travis E. Doom

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

Molecular visualization programs are available on many platforms. They allow a user to visualize and manipulate molecular structures. PocketMol provides the same functionality on a Pocket PC handheld computer. Using standard protein data bank (pdb) files, the user can move, rotate, and scale a protein to explore its structure and function. The user can choose from a standard backbone view or a simplified view using only alpha carbon atoms. PocketMolGX uses the Microsoft Game API to provide fast animation that is quite smooth. PocketMol is designed as an aid for those wishing to explore or demonstrate protein structures without the availability of a full-size computer

Original language	American English
Title of host publication	Proceedings - 2nd Annual IEEE International Symposium on Bioinformatics and Bioengineering, BIBE 2001
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	11-14
Number of pages	4
ISBN (Electronic)	0769514235, 9780769514239
DOIs	https://doi.org/10.1109/BIBE.2001.974406
State	Published - Nov 4 2001
Event	2nd Annual IEEE International Symposium on Bioinformatics and Bioengineering, BIBE 2001 - Bethesda, United States Duration: Nov 4 2001 → Nov 6 2001

Conference

Conference	2nd Annual IEEE International Symposium on Bioinformatics and Bioengineering, BIBE 2001
Country/Territory	United States
City	Bethesda
Period	11/4/01 → 11/6/01

ASJC Scopus Subject Areas

Biotechnology
Computer Science Applications
Biomedical Engineering
Health Informatics

Keywords

Handheld computers
Proteins
Personal communication networks
Data visualization
Spine
Animation
Read-write memory
Operating
systems
Bioinformatics
Computer Science

Disciplines

Bioinformatics
Communication Technology and New Media
Databases and Information Systems
OS and Networks
Science and Technology Studies

Access to Document

10.1109/BIBE.2001.974406

Cite this

PocketMol: A molecular visualization tool for the Pocket PC. / Gilder, J. R.; Raymer, Michael L.; Doom, Travis E.
Proceedings - 2nd Annual IEEE International Symposium on Bioinformatics and Bioengineering, BIBE 2001. Institute of Electrical and Electronics Engineers Inc., 2001. p. 11-14 974406.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Gilder, JR, Raymer, ML & Doom, TE 2001, PocketMol: A molecular visualization tool for the Pocket PC. in Proceedings - 2nd Annual IEEE International Symposium on Bioinformatics and Bioengineering, BIBE 2001., 974406, Institute of Electrical and Electronics Engineers Inc., pp. 11-14, 2nd Annual IEEE International Symposium on Bioinformatics and Bioengineering, BIBE 2001, Bethesda, United States, 11/4/01. https://doi.org/10.1109/BIBE.2001.974406

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title = "PocketMol: A molecular visualization tool for the Pocket PC",

abstract = " Molecular visualization programs are available on many platforms. They allow a user to visualize and manipulate molecular structures. PocketMol provides the same functionality on a Pocket PC handheld computer. Using standard protein data bank (pdb) files, the user can move, rotate, and scale a protein to explore its structure and function. The user can choose from a standard backbone view or a simplified view using only alpha carbon atoms. PocketMolGX uses the Microsoft Game API to provide fast animation that is quite smooth. PocketMol is designed as an aid for those wishing to explore or demonstrate protein structures without the availability of a full-size computer",

keywords = "Handheld computers, Proteins, Personal communication networks, Data visualization, Spine, Animation, Read-write memory, Operating, systems, Bioinformatics, Computer Science",

author = "Gilder, {J. R.} and Raymer, {Michael L.} and Doom, {Travis E.}",

note = "Publisher Copyright: {\textcopyright} 2001 IEEE.; 2nd Annual IEEE International Symposium on Bioinformatics and Bioengineering, BIBE 2001 ; Conference date: 04-11-2001 Through 06-11-2001",

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doi = "10.1109/BIBE.2001.974406",

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N2 - Molecular visualization programs are available on many platforms. They allow a user to visualize and manipulate molecular structures. PocketMol provides the same functionality on a Pocket PC handheld computer. Using standard protein data bank (pdb) files, the user can move, rotate, and scale a protein to explore its structure and function. The user can choose from a standard backbone view or a simplified view using only alpha carbon atoms. PocketMolGX uses the Microsoft Game API to provide fast animation that is quite smooth. PocketMol is designed as an aid for those wishing to explore or demonstrate protein structures without the availability of a full-size computer

AB - Molecular visualization programs are available on many platforms. They allow a user to visualize and manipulate molecular structures. PocketMol provides the same functionality on a Pocket PC handheld computer. Using standard protein data bank (pdb) files, the user can move, rotate, and scale a protein to explore its structure and function. The user can choose from a standard backbone view or a simplified view using only alpha carbon atoms. PocketMolGX uses the Microsoft Game API to provide fast animation that is quite smooth. PocketMol is designed as an aid for those wishing to explore or demonstrate protein structures without the availability of a full-size computer

KW - Handheld computers

KW - Proteins

KW - Personal communication networks

KW - Data visualization

KW - Spine

KW - Animation

KW - Read-write memory

KW - Operating

KW - systems

KW - Bioinformatics

KW - Computer Science

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BT - Proceedings - 2nd Annual IEEE International Symposium on Bioinformatics and Bioengineering, BIBE 2001

PB - Institute of Electrical and Electronics Engineers Inc.

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PocketMol: A molecular visualization tool for the Pocket PC

Abstract

Conference

ASJC Scopus Subject Areas

Keywords

Disciplines

Access to Document

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Cite this